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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936725.1_cds_XP_016482216.1_73468
CDS Infomation

[gene=LOC107803111] [db_xref=GeneID:107803111] [protein=alpha-ketoglutarate-dependent dioxygenase alkB-like] [protein_id=XP_016482216.1] [location=complement(join(19612..20590,20715..20809))] [gbkey=CDS]
Sequence

ATGTACGGTTCCAACCCTAGCACCGACGATGAAGAGCGAACCGCTTTCAGGAAGGCTGAA
AAGAAATACAAGCTGTATTATGACAATACCCGAAAGAAAAAGCAACCAAGACCAGTGGAT
TTGTCGGAGGTAATTGATTTTAAGTCAATTTCAGAGTCTTACCATCGAAATGGTGAACTT
CCTTCAGGCATTTTCGCAATTCAATGTGATTTTGATAGTCTTGTCTTCTGCTTGGAGAGT
CATCCAGGGTTTTATTTCATTCCTGGAGCATTAACTGTTGAGGAGCAGTGCCGATGGATA
AAGGAGAGTTTAACAAGTTTTCCTCAACCCCCAAACAGGACCAACCATAATGCAATTTAT
GGTCCTCTACAGGACTTATTTGCTGCTGCCAAGGATAATAAAGCTTTGATTCAAGAAGAT
AAGCACTGTGGTACCAATAATTCTGAGGTGGAAATCATCCAAAACGACATAAATTGTCCG
AAATGGAATTTTTTTGATCAATCAGGTGCATTATCTAGAGAAGTTACATGCAAATCAGTG
CCAGCCTCTGTTTTGCTTCGTAAGTTAAGGTGGAGCACCCTTGGCTTGCAGTTTGACTGG
TCGAAACGGAACTATAATATTTCTCTGCCTCACAAAAAGATACCTGATGCACTTTGCCTG
CTGGCTGAAAGAATGGCAGCAGCTGCCCTGCCTTCGGGTGAAGTATTCCAAGCAGAAGCA
GCAATTGTTAATTACTTTGGGCTAGGCGACACGCTTGGTGGCCATGTTGATGATATGGAG
AAGGATTGGAGTAAACCTATTGTTAGTATGAGTTTGGGCTGTAAAGGTATTTTCCTTATC
GGCGGAAAGTCTAGGGACGTTCCTCCTGTTGCAATGTTCGTTCGAAGTGGGGATGTTATT
CTTATGGCAGGACAAGCAAGGGAATGCTTCCATGGCGTCCCTAGGATCTTCACTGATAAA
GAACACGCCGAGATATCCTCCCTTGAATTGCAGTTTTCTGATGAAGATGACTCTGCTTTC
TTAGAGTACATTAGGACTTCTCGAATCAATATCAACATTAGACAAGTATTCTAG

Peptide Sequence

PEP ID

XP_016482216.1
PEP Infomation

PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like [Nicotiana tabacum]
Sequence

MYGSNPSTDDEERTAFRKAEKKYKLYYDNTRKKKQPRPVDLSEVIDFKSISESYHRNGEL
PSGIFAIQCDFDSLVFCLESHPGFYFIPGALTVEEQCRWIKESLTSFPQPPNRTNHNAIY
GPLQDLFAAAKDNKALIQEDKHCGTNNSEVEIIQNDINCPKWNFFDQSGALSREVTCKSV
PASVLLRKLRWSTLGLQFDWSKRNYNISLPHKKIPDALCLLAERMAAAALPSGEVFQAEA
AIVNYFGLGDTLGGHVDDMEKDWSKPIVSMSLGCKGIFLIGGKSRDVPPVAMFVRSGDVI
LMAGQARECFHGVPRIFTDKEHAEISSLELQFSDEDDSAFLEYIRTSRININIRQVF

Transcript Sequence

Gene sequence data has not been registered.